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LOC100797436 telomere repeat-binding protein 5 [ Glycine max (soybean) ]

Gene ID: 100797436, updated on 18-Aug-2023

Summary

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Gene symbol
LOC100797436
Gene description
telomere repeat-binding protein 5
Locus tag
GLYMA_11G138700v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100797436 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 11 NC_038247.2 (10523351..10528584, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 11 NC_038247.1 (10549567..10554860, complement)

Chromosome 11 - NC_038247.2Genomic Context describing neighboring genes Neighboring gene scarecrow-like protein 14 Neighboring gene scarecrow-like protein 14 Neighboring gene oxysterol-binding protein-related protein 3C-like Neighboring gene respirasome Complex Assembly Factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
telomere repeat-binding protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038247.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    10523351..10528584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006590920.4 → XP_006590983.1  telomere repeat-binding protein 5 isoform X1

    See identical proteins and their annotated locations for XP_006590983.1

    UniProtKB/TrEMBL
    A0A0R0HH12, K7LPN3
    Conserved Domains (1) summary
    cd11660
    Location:590 → 640
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family

  2. XM_014764040.3 → XP_014619526.1  telomere repeat-binding protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A0R0HH12, K7LPN3
    Conserved Domains (1) summary
    cd11660
    Location:590 → 640
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family

  3. XM_041006728.1 → XP_040862662.1  telomere repeat-binding protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A0R0HH12, K7LPN4
    Conserved Domains (1) summary
    cd11660
    Location:584 → 634
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family

  4. XM_003539036.5 → XP_003539084.1  telomere repeat-binding protein 5 isoform X2

    See identical proteins and their annotated locations for XP_003539084.1

    UniProtKB/TrEMBL
    A0A0R0HH12, K7LPN4
    Conserved Domains (1) summary
    cd11660
    Location:584 → 634
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
Nucleotide Protein
Heading Accession and Version

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