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LOC100801214 probable E3 ubiquitin-protein ligase HERC4 [ Glycine max (soybean) ]

Gene ID: 100801214, updated on 3-Feb-2025

Summary

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Gene symbol
LOC100801214
Gene description
probable E3 ubiquitin-protein ligase HERC4
Locus tag
GLYMA_14G145900v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100801214 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2025_01 current Glycine_max_v4.0 (GCF_000004515.6) 14 NC_038250.2 (26812415..26824214)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 14 NC_038250.1 (30895985..30907786)

Chromosome 14 - NC_038250.2Genomic Context describing neighboring genes Neighboring gene GATA transcription factor 12 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC112999361 Neighboring gene AP2 domain transcription factor TINY

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase HERC4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000004515.6-RS_2025_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038250.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    26812415..26824214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003545561.5 → XP_003545609.1  probable E3 ubiquitin-protein ligase HERC4 isoform X1

    UniProtKB/TrEMBL
    I1MA07
    Conserved Domains (1) summary
    COG5184
    Location:23 → 441
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  2. XM_006596124.3 → XP_006596187.1  probable E3 ubiquitin-protein ligase HERC4 isoform X2

    See identical proteins and their annotated locations for XP_006596187.1

    UniProtKB/TrEMBL
    I1MA07
    Conserved Domains (1) summary
    COG5184
    Location:27 → 408
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  3. XM_006596123.3 → XP_006596186.1  probable E3 ubiquitin-protein ligase HERC4 isoform X2

    See identical proteins and their annotated locations for XP_006596186.1

    UniProtKB/TrEMBL
    I1MA07
    Conserved Domains (1) summary
    COG5184
    Location:27 → 408
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
Nucleotide Protein
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