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LOC100804420 F-box/kelch-repeat protein At1g30090 [ Glycine max (soybean) ]

Gene ID: 100804420, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100804420
Gene description
F-box/kelch-repeat protein At1g30090
Locus tag
GLYMA_15G093300v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100804420 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
1
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 15 NC_038251.2 (7227124..7229263)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 15 NC_038251.1 (7239858..7242299)

Chromosome 15 - NC_038251.2Genomic Context describing neighboring genes Neighboring gene protein TIFY 5A Neighboring gene uncharacterized LOC100807625 Neighboring gene uncharacterized LOC121173613 Neighboring gene cullin-4 Neighboring gene glucan endo-1,3-beta-glucosidase 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/kelch-repeat protein At1g30090

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038251.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    7227124..7229263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003546033.5 → XP_003546081.1  F-box/kelch-repeat protein At1g30090

    See identical proteins and their annotated locations for XP_003546081.1

    UniProtKB/TrEMBL
    I1MF25
    Conserved Domains (3) summary
    PHA03098
    Location:125 → 351
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:146 → 192
    Kelch; KELCH repeat [structural motif]
    pfam00646
    Location:51 → 95
    F-box; F-box domain
Nucleotide Protein
Heading Accession and Version

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