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LOC100814705 tRNA (guanine(10)-N2)-methyltransferase homolog [ Glycine max (soybean) ]

Gene ID: 100814705, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100814705
Gene description
tRNA (guanine(10)-N2)-methyltransferase homolog
Locus tag
GLYMA_05G121000v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100814705 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 5 NC_038241.2 (31421562..31425277, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 5 NC_038241.1 (31383879..31387553, complement)

Chromosome 5 - NC_038241.2Genomic Context describing neighboring genes Neighboring gene putative clathrin assembly protein At4g02650 Neighboring gene uncharacterized LOC102662259 Neighboring gene uncharacterized LOC100815224 Neighboring gene vacuolar iron transporter homolog 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (guanine(10)-N2)-methyltransferase homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038241.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    31421562..31425277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003524709.5 → XP_003524757.1  tRNA (guanine(10)-N2)-methyltransferase homolog

    UniProtKB/TrEMBL
    I1K2S5
    Conserved Domains (1) summary
    COG1041
    Location:1 → 418
    Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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