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LOC100825960 uncharacterized LOC100825960 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100825960, updated on 6-Apr-2023

Summary

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Gene symbol
LOC100825960
Gene description
uncharacterized LOC100825960
Locus tag
BRADI_4g38680v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100825960 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 4 NC_016134.3 (43452475..43455342)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 4 NC_016134.2 (43634672..43637515)

Chromosome 4 - NC_016134.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112272518 Neighboring gene putative disease resistance protein RGA3 Neighboring gene U-box domain-containing protein 33 Neighboring gene uncharacterized LOC104584738 Neighboring gene U-box domain-containing protein 33

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources. Mochida K, et al. PLoS One, 2013. PMID 24130698, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC100825960

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016134.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    43452475..43455342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010240236.3 → XP_010238538.1  uncharacterized protein LOC100825960 isoform X1

    UniProtKB/TrEMBL
    A0A2K2CT59

  2. XM_003576826.4 → XP_003576874.1  uncharacterized protein LOC100825960 isoform X2

    UniProtKB/TrEMBL
    I1IT33
Nucleotide Protein Strain
Heading Accession and Version

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