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LOC100836187 F-box/kelch-repeat protein At1g30090 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100836187, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100836187
Gene description
F-box/kelch-repeat protein At1g30090
Locus tag
BRADI_1g58530v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100836187 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (57541151..57543373, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (57595867..57598082, complement)

Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene protein STRICTOSIDINE SYNTHASE-LIKE 10-like Neighboring gene NAC domain-containing protein 83 Neighboring gene uncharacterized LOC104582331 Neighboring gene uncharacterized LOC104581738

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/kelch-repeat protein At1g30090

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    57541151..57543373 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003557606.4 → XP_003557654.1  F-box/kelch-repeat protein At1g30090

    UniProtKB/TrEMBL
    I1H439
    Conserved Domains (4) summary
    smart00612
    Location:161 → 208
    Kelch; Kelch domain
    sd00038
    Location:148 → 194
    Kelch; KELCH repeat [structural motif]
    pfam00646
    Location:53 → 97
    F-box; F-box domain
    pfam01344
    Location:197 → 243
    Kelch_1; Kelch motif
Nucleotide Protein Strain
Heading Accession and Version

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