CIDEC cell death inducing DFFA like effector c [Gallus gallus (chicken)] - Gene

Summary

Symbol: CIDECprovided by CGNC
Full Name: cell death inducing DFFA like effector cprovided by CGNC
Primary source: CGNC:63416
See related: Ensembl:ENSGALG00010009557
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 11

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	11	NC_052542.1 (18018255..18020133, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	11	NC_052583.1 (18366352..18368205, complement)

Chromosome 11 - NC_052542.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in apoptotic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of apoptotic process	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: lipid transferase CIDEC; cell death activator CIDE-3

Names: cell death activator CIDE-3-like; fat-specific protein FSP27-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001277678.2 → NP_001264607.1 lipid transferase CIDEC

Status: VALIDATED

Source sequence(s)

JAENSK010000248

UniProtKB/TrEMBL

D7RXP0

Related

ENSGALP00010013169.1, ENSGALT00010022785.1

Conserved Domains (1) summary

cl02541
Location:37 → 111

CIDE_N; CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

18018255..18020133 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046899370.1 → XP_046755326.1 cell death activator CIDE-3 isoform X1

UniProtKB/TrEMBL

D7RXP0

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

18366352..18368205 complement

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GenBank, FASTA, Sequence Viewer (Graphics)