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RNA5SP325 RNA, 5S ribosomal pseudogene 325 [ Homo sapiens (human) ]

Gene ID: 100873591, updated on 17-Sep-2024

Summary

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Official Symbol
RNA5SP325provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 325provided by HGNC
Primary source
HGNC:HGNC:43225
See related
Ensembl:ENSG00000200626 AllianceGenome:HGNC:43225
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S325
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Genomic context

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See RNA5SP325 in Genome Data Viewer
Location:
10q25.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (106970021..106970150)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (107857002..107857131)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (108729779..108729908)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378472 Neighboring gene NANOG hESC enhancer GRCh37_chr10:108374682-108375284 Neighboring gene sortilin related VPS10 domain containing receptor 1 Neighboring gene uncharacterized LOC105378473 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2800 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:108610091-108610677 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3990 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:108701498-108702697 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr10:108716137-108716637 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3991 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:108924180-108924373 Neighboring gene uncharacterized LOC105378475 Neighboring gene uncharacterized LOC105378474 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3992 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2801 Neighboring gene RNA, 5S ribosomal pseudogene 326

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 325

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033473.1 

    Range
    101..230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    106970021..106970150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    107857002..107857131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials