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CHRM3-AS1 CHRM3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100873984, updated on 10-Dec-2024

Summary

Official Symbol
CHRM3-AS1provided by HGNC
Official Full Name
CHRM3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40150
See related
Ensembl:ENSG00000234601 AllianceGenome:HGNC:40150
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See CHRM3-AS1 in Genome Data Viewer
Location:
1q43
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (239898019..239899872, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (239311169..239313026, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (240061319..240063172, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene cholinergic receptor muscarinic 3 Neighboring gene CHRM3 antisense RNA 2 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:239973107-239973608 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:239973609-239974110 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:239974111-239974612 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:239974613-239975113 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:239977657-239978198 Neighboring gene NANOG hESC enhancer GRCh37_chr1:239996955-239997498 Neighboring gene uncharacterized LOC124904567 Neighboring gene uncharacterized LOC105373224 Neighboring gene 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046582.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL356361
    Related
    ENST00000444721.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    239898019..239899872 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    239311169..239313026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)