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AKT3-IT1 AKT3 intronic transcript 1 [ Homo sapiens (human) ]

Gene ID: 100874263, updated on 12-Sep-2024

Summary

Official Symbol
AKT3-IT1provided by HGNC
Official Full Name
AKT3 intronic transcript 1provided by HGNC
Primary source
HGNC:HGNC:41304
See related
Ensembl:ENSG00000228939 AllianceGenome:HGNC:41304
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See AKT3-IT1 in Genome Data Viewer
Location:
1q44
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (243793205..243794400, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (243204335..243205531, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (243956507..243957702, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene SHH signaling and ciliogenesis regulator SDCCAG8 Neighboring gene uncharacterized LOC124904569 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:243617070-243618269 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:243639115-243639288 Neighboring gene Sharpr-MPRA regulatory region 5448 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:243645455-243646070 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:243647393-243647951 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:243653141-243653664 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:243653665-243654188 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:243659455-243660106 Neighboring gene AKT serine/threonine kinase 3 Neighboring gene Sharpr-MPRA regulatory region 1428 Neighboring gene fatty acid binding protein 7 pseudogene 1 Neighboring gene VISTA enhancer hs545 Neighboring gene NANOG hESC enhancer GRCh37_chr1:243903627-243904128 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:244012454-244012954 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:244087610-244088258 Neighboring gene Sharpr-MPRA regulatory region 14056 Neighboring gene long intergenic non-protein coding RNA 2774 Neighboring gene uncharacterized LOC105373258 Neighboring gene uncharacterized LOC124904570 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2831

Genomic regions, transcripts, and products

General gene information

Other Names

  • AKT3 intronic transcript 1 (non-protein coding)

Clone Names

  • DKFZp779H0472

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046761.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL592151
    Related
    ENST00000417120.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    243793205..243794400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187519.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    805313..806508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    243204335..243205531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)