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Mir5618 microRNA 5618 [ Mus musculus (house mouse) ]

Gene ID: 100885830, updated on 17-Aug-2024

Summary

Official Symbol
Mir5618provided by MGI
Official Full Name
microRNA 5618provided by MGI
Primary source
MGI:MGI:5453462
See related
Ensembl:ENSMUSG00000093615 miRBase:MI0019186; AllianceGenome:MGI:5453462
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm23685; mmu-mir-5618
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See Mir5618 in Genome Data Viewer
Location:
9; 9 A1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (7784391..7784441)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (7784390..7784440)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene chromobox 3, pseudogene 8 Neighboring gene ribosomal protein L29 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E2884 Neighboring gene STARR-positive B cell enhancer mm9_chr9:7764868-7765169 Neighboring gene transmembrane protein 123 Neighboring gene STARR-seq mESC enhancer starr_23223 Neighboring gene baculoviral IAP repeat-containing 2 Neighboring gene STARR-seq mESC enhancer starr_23227 Neighboring gene baculoviral IAP repeat-containing 3 Neighboring gene STARR-positive B cell enhancer mm9_chr9:7872853-7873154 Neighboring gene STARR-positive B cell enhancer mm9_chr9:7873159-7873459

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_049191.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    CT030639
    Related
    ENSMUST00000175907.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    7784391..7784441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)