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LOC100910628 uncharacterized LOC100910628 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100910628, updated on 17-Aug-2024

Summary

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Symbol
LOC100910628provided by RGD
Full Name
uncharacterized LOC100910628provided by RGD
Primary source
RGD:6497764
See related
EnsemblRapid:ENSRNOG00000086899 AllianceGenome:RGD:6497764
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Lung (RPKM 54.9), Heart (RPKM 18.1) and 7 other tissues See more
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Genomic context

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See LOC100910628 in Genome Data Viewer
Location:
17p12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (27552587..27556022, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (27346244..27350547, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (28030742..28035002, complement)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene triosephosphate isomerase 1 like 2 Neighboring gene uncharacterized LOC102549751 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC120097796 Neighboring gene D-3-phosphoglycerate dehydrogenase-like Neighboring gene lymphocyte antigen 86 Neighboring gene coagulation factor XIII A1 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    27552587..27556022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_360955.5 RNA Sequence

    Related
    ENSRNOT00000168244.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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