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LOC100911719 uncharacterized LOC100911719 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100911719, updated on 17-Aug-2024

Summary

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Symbol
LOC100911719provided by RGD
Full Name
uncharacterized LOC100911719provided by RGD
Primary source
RGD:6491284
See related
AllianceGenome:RGD:6491284
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Brain (RPKM 29.2), Liver (RPKM 28.4) and 2 other tissues See more
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Genomic context

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See LOC100911719 in Genome Data Viewer
Location:
13q26
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (99520752..99530108, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (96989337..96998938, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (103388694..103397090, complement)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134481540 Neighboring gene 3'(2'), 5'-bisphosphate nucleotidase 1 Neighboring gene glutamyl-prolyl-tRNA synthetase 1 Neighboring gene solute carrier family 30, member 10 Neighboring gene U7 small nuclear RNA Neighboring gene lysophospholipase-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    99520752..99530108 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005492715.2 RNA Sequence

  2. XR_595605.3 RNA Sequence

  3. XR_001840942.2 RNA Sequence

  4. XR_005492714.2 RNA Sequence

  5. XR_005492717.2 RNA Sequence

  6. XR_005492713.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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