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MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100941168, updated on 8-Mar-2024

Summary

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Gene symbol
MICAL3
Gene description
microtubule associated monooxygenase, calponin and LIM domain containing 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See MICAL3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852499.1 (6062376..6263614)

NW_003852499.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha 8 Neighboring gene peroxisomal biogenesis factor 26 Neighboring gene uncharacterized LOC111727395 Neighboring gene protein BEX3-like Neighboring gene bcl-2-like protein 13 Neighboring gene BH3 interacting domain death agonist

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852499 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-actin-monooxygenase MICAL3
Names
microtubule associated monoxygenase, calponin and LIM domain containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852499.1 Reference OtoGar3

    Range
    6062376..6263614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023517064.1 → XP_023372832.1  F-actin-monooxygenase MICAL3 isoform X1

    Conserved Domains (5) summary
    cd09439
    Location:792 → 846
    LIM_Mical; The LIM domain of Mical (molecule interacting with CasL)
    pfam00307
    Location:524 → 624
    CH; Calponin homology (CH) domain
    pfam12130
    Location:1854 → 1988
    DUF3585; Protein of unknown function (DUF3585)
    cl26464
    Location:1073 → 1559
    Atrophin-1; Atrophin-1 family
    cl27552
    Location:87 → 274
    FAD_binding_3; FAD binding domain

  2. XM_023517065.1 → XP_023372833.1  F-actin-monooxygenase MICAL3 isoform X2

    Conserved Domains (6) summary
    cd09439
    Location:792 → 846
    LIM_Mical; The LIM domain of Mical (molecule interacting with CasL)
    pfam00307
    Location:524 → 624
    CH; Calponin homology (CH) domain
    pfam12130
    Location:1837 → 1971
    DUF3585; Protein of unknown function (DUF3585)
    cl25642
    Location:1464 → 1968
    DUF390; Protein of unknown function (DUF390)
    cl26464
    Location:1073 → 1559
    Atrophin-1; Atrophin-1 family
    cl27552
    Location:87 → 274
    FAD_binding_3; FAD binding domain

  3. XM_023517066.1 → XP_023372834.1  F-actin-monooxygenase MICAL3 isoform X3

    Conserved Domains (5) summary
    cd09439
    Location:764 → 818
    LIM_Mical; The LIM domain of Mical (molecule interacting with CasL)
    pfam00307
    Location:524 → 624
    CH; Calponin homology (CH) domain
    pfam12130
    Location:1826 → 1960
    DUF3585; Protein of unknown function (DUF3585)
    cl26464
    Location:1045 → 1531
    Atrophin-1; Atrophin-1 family
    cl27552
    Location:87 → 274
    FAD_binding_3; FAD binding domain

  4. XM_023517067.1 → XP_023372835.1  F-actin-monooxygenase MICAL3 isoform X4

    Conserved Domains (6) summary
    cd09439
    Location:764 → 818
    LIM_Mical; The LIM domain of Mical (molecule interacting with CasL)
    pfam00307
    Location:524 → 624
    CH; Calponin homology (CH) domain
    pfam12130
    Location:1809 → 1943
    DUF3585; Protein of unknown function (DUF3585)
    cl25642
    Location:1436 → 1940
    DUF390; Protein of unknown function (DUF390)
    cl26464
    Location:1045 → 1531
    Atrophin-1; Atrophin-1 family
    cl27552
    Location:87 → 274
    FAD_binding_3; FAD binding domain
Nucleotide Protein
Heading Accession and Version

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