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LOC101069599 AN1-type zinc finger protein 5-like [ Takifugu rubripes (torafugu) ]

Gene ID: 101069599, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101069599
Gene description
AN1-type zinc finger protein 5-like
See related
Ensembl:ENSTRUG00000011466
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
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Genomic context

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See LOC101069599 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 6 NC_042290.1 (2529857..2535525, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 6 NC_018895.1 (1383523..1389005, complement)

Chromosome 6 - NC_042290.1Genomic Context describing neighboring genes Neighboring gene transmembrane channel-like 2a Neighboring gene dynein regulatory complex subunit 7-like Neighboring gene cyclin B1 Neighboring gene uncharacterized LOC115250246

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AN1-type zinc finger protein 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042290.1 Reference fTakRub1.2 Primary Assembly

    Range
    2529857..2535525 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011604466.2 → XP_011602768.2  AN1-type zinc finger protein 5-like isoform X1

    UniProtKB/TrEMBL
    H2TWA0
    Conserved Domains (2) summary
    smart00154
    Location:163 → 200
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:12 → 35
    zf-A20; A20-like zinc finger

  2. XM_029837765.1 → XP_029693625.1  AN1-type zinc finger protein 5-like isoform X2

    Conserved Domains (2) summary
    smart00154
    Location:133 → 159
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:12 → 35
    zf-A20; A20-like zinc finger

  3. XM_029837764.1 → XP_029693624.1  AN1-type zinc finger protein 5-like isoform X1

    UniProtKB/TrEMBL
    H2TWA0
    Conserved Domains (2) summary
    smart00154
    Location:163 → 200
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:12 → 35
    zf-A20; A20-like zinc finger

  4. XM_011604465.2 → XP_011602767.2  AN1-type zinc finger protein 5-like isoform X1

    UniProtKB/TrEMBL
    H2TWA0
    Related
    ENSTRUP00000062334.1, ENSTRUT00000084554.1
    Conserved Domains (2) summary
    smart00154
    Location:163 → 200
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:12 → 35
    zf-A20; A20-like zinc finger
Nucleotide Protein
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