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CG42697 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 10178822, updated on 18-Sep-2024

Summary

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Official Symbol
CG42697provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0261587
Locus tag
Dmel_CG42697
See related
AllianceGenome:FB:FBgn0261587
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG42697
Orthologs
all
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Genomic context

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See CG42697 in Genome Data Viewer
Location:
55E1-55E1; 2-86 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18611645..18612730, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14499150..14500235, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR46271 Neighboring gene uncharacterized protein Neighboring gene Phosphoenolpyruvate carboxykinase 1 Neighboring gene Rad, Gem/Kir family member 2 Neighboring gene Guanine nucleotide exchange factor in mesoderm Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein S28 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The origin and structural evolution of de novo genes in Drosophila. Peng J, et al. Nat Commun, 2024 Jan 27. PMID 38280868, Free PMC Article
  2. A genetic screen for olfactory habituation mutations in Drosophila: analysis of novel foraging alleles and an underlying neural circuit. Eddison M, et al. PLoS One, 2012. PMID 23284741, Free PMC Article
  3. An expanded toolkit for Drosophila gene tagging using synthesized homology donor constructs for CRISPR-mediated homologous recombination. Kanca O, et al. Elife, 2022 Jun 20. PMID 35723254, Free PMC Article
  4. Expression-Based Cell Lineage Analysis in Drosophila Through a Course-Based Research Experience for Early Undergraduates. Olson JM, et al. G3 (Bethesda), 2019 Nov 5. PMID 31690598, Free PMC Article
  5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG42697-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    18611645..18612730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202038.2 → NP_001188967.1  uncharacterized protein Dmel_CG42697 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188967.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4JCU6, C0PV95
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4JCU6 A0A0B4JCU6

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials