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lncRNA:CR32218 long non-coding RNA:CR32218 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 10178829, updated on 9-Dec-2024

Summary

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Official Symbol
lncRNA:CR32218provided by FlyBase
Official Full Name
long non-coding RNA:CR32218provided by FlyBase
Primary source
FLYBASE:FBgn0052218
Locus tag
Dmel_CR32218
See related
AllianceGenome:FB:FBgn0052218
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG8037; CR32218; Dmel\CR32218
Summary
Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See lncRNA:CR32218 in Genome Data Viewer
Location:
76D3-76D3; 3-46 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (19895216..19896391, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (19888316..19889491, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Rab8 Neighboring gene Ubiquitin specific protease 32 Neighboring gene Mi-2 Neighboring gene Suppressor of Triplolethal Neighboring gene antisense RNA:CR43889 Neighboring gene Precursor RNA processing 3 Neighboring gene Mtr3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs. Wilk R, et al. Genes Dev, 2016 Mar 1. PMID 26944682, Free PMC Article
  2. The Drosophila embryo at single-cell transcriptome resolution. Karaiskos N, et al. Science, 2017 Oct 13. PMID 28860209
  3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  4. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
  5. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR32218-RA; Dmel\lncRNA:CR32218-RA; CR32218-RA; Dmel\CR32218-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    19895216..19896391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_037751.2 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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