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MYOSLID-AS1 MYOSLID antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101927865, updated on 17-Sep-2024

Summary

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Official Symbol
MYOSLID-AS1provided by HGNC
Official Full Name
MYOSLID antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:54063
See related
AllianceGenome:HGNC:54063
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 5.4), spleen (RPKM 0.7) and 7 other tissues See more
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Genomic context

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See MYOSLID-AS1 in Genome Data Viewer
Location:
2q33.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (207186690..207254316, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (207668881..207736516, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (208051414..208119040, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene KLF transcription factor 7 Neighboring gene Sharpr-MPRA regulatory region 11101 Neighboring gene microRNA 2355 Neighboring gene NANOG hESC enhancer GRCh37_chr2:208007006-208007507 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:208013849-208014350 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12271 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:208028265-208028973 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:208028974-208029682 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17030 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancers GRCh37_chr2:208030391-208031099 and GRCh37_chr2:208031100-208031807 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:208031808-208032516 Neighboring gene microRNA 7845 Neighboring gene NANOG hESC enhancer GRCh37_chr2:208064814-208065392 Neighboring gene MPRA-validated peak4025 silencer Neighboring gene uncharacterized LOC124907971 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17031 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17032 Neighboring gene myocardin-induced smooth muscle lncRNA, inducer of differentiation Neighboring gene long intergenic non-protein coding RNA 1802 Neighboring gene microRNA 1302-4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12274 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:208175080-208175829 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17033 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17034 Neighboring gene uncharacterized LOC105373851 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17035

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Clone Names

  • AC007879.2, AC007879.3, AC007879.5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110283.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007879, DB338675, HY006998

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    207186690..207254316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    207668881..207736516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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