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LOC101930149 uncharacterized LOC101930149 [ Homo sapiens (human) ]

Gene ID: 101930149, updated on 17-Sep-2024

Summary

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Gene symbol
LOC101930149
Gene description
uncharacterized LOC101930149
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101930149 in Genome Data Viewer
Location:
8p22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (13338338..13357485)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (13601520..13624015)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902103 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:12915937-12916437 Neighboring gene RNA, U6 small nuclear 842, pseudogene Neighboring gene MED14-independent group 3 enhancer GRCh37_chr8:12947375-12948574 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:12957644-12958023 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:12962666-12963312 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:12965381-12965880 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:12980176-12980808 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:12980809-12981441 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:12982170-12982670 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:12982671-12983171 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18956 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18957 Neighboring gene DLC1 Rho GTPase activating protein Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:13223844-13225043 Neighboring gene MT-ND4 pseudogene 7 Neighboring gene uncharacterized LOC124901890 Neighboring gene RNA, 5S ribosomal pseudogene 255

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    13338338..13357485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007060830.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    13601520..13624015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078750.1 RNA Sequence

  2. XR_007078749.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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