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LOC102117847 disintegrin and metalloproteinase domain-containing protein 1a [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102117847, updated on 3-Dec-2024

Summary

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Gene symbol
LOC102117847
Gene description
disintegrin and metalloproteinase domain-containing protein 1a
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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Genomic context

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See LOC102117847 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 11 NC_088385.1 (118778005..118786567)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 11 NC_052265.1 (108708348..108716957)

Chromosome 11 - NC_088385.1Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase 2 family member Neighboring gene uncharacterized LOC107126784 Neighboring gene uncharacterized LOC135966404 Neighboring gene MAPK activated protein kinase 5 Neighboring gene uncharacterized LOC123567584 Neighboring gene disintegrin and metalloproteinase domain-containing protein 1a Neighboring gene transmembrane protein 116

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and analysis of monkey fertilin reveals novel alpha subunit isoforms. Perry AC, et al. Biochem J, 1995 May 1. PMID 7741716, Free PMC Article
  2. Macaque MDC family of proteins: sequence analysis, tissue distribution and processing in the male reproductive tract. Frayne J, et al. Mol Hum Reprod, 1998 May. PMID 9665629
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in binding of sperm to zona pellucida IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in male gonad development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm head plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
disintegrin and metalloproteinase domain-containing protein 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088385.1 Reference T2T-MFA8v1.0

    Range
    118778005..118786567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065525257.1 → XP_065381329.1  disintegrin and metalloproteinase domain-containing protein 1a

    UniProtKB/TrEMBL
    O02844, Q28476

  2. XM_065525258.1 → XP_065381330.1  disintegrin and metalloproteinase domain-containing protein 1a

    UniProtKB/TrEMBL
    O02844, Q28476

  3. XM_015431561.3 → XP_015287047.3  disintegrin and metalloproteinase domain-containing protein 1a

    UniProtKB/TrEMBL
    O02844, Q28476

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001319465.1: Suppressed sequence

    Description
    NM_001319465.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact [email protected] for further information.
Nucleotide Protein
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