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MIR6890 microRNA 6890 [ Homo sapiens (human) ]

Gene ID: 102465536, updated on 17-Sep-2024

Summary

Official Symbol
MIR6890provided by HGNC
Official Full Name
microRNA 6890provided by HGNC
Primary source
HGNC:HGNC:49990
See related
Ensembl:ENSG00000284488 miRBase:MI0022737; AllianceGenome:HGNC:49990
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
hsa-mir-6890
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR6890 in Genome Data Viewer
Location:
3p21.31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (49099854..49099914, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (49127927..49127987, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (49137287..49137347, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14352 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49065964-49066566 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49066567-49067168 Neighboring gene inosine monophosphate dehydrogenase 2 Neighboring gene glutamine rich 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:49097169-49097668 Neighboring gene RNA, 7SL, cytoplasmic 182, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:49130628-49131140 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14353 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19851 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19852 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:49137787-49138287 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49140762-49141412 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19853 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19854 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49142715-49143364 Neighboring gene glutaminyl-tRNA synthetase 1 Neighboring gene ubiquitin specific peptidase 19 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49157555-49158544 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49158545-49159533 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19855 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:49165495-49166412 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49168941-49169756 Neighboring gene laminin subunit beta 2 Neighboring gene uncharacterized LOC124909377

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_106950.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC135506
    Related
    ENST00000620931.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    49099854..49099914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    49127927..49127987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)