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n-TCgca56 nuclear encoded tRNA cysteine 56 (anticodon GCA) [ Mus musculus (house mouse) ]

Gene ID: 102467290, updated on 17-Aug-2024

Summary

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Official Symbol
n-TCgca56provided by MGI
Official Full Name
nuclear encoded tRNA cysteine 56 (anticodon GCA)provided by MGI
Primary source
MGI:MGI:4413823
See related
AllianceGenome:MGI:4413823
Gene type
tRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
n-Tc56
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Genomic context

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See n-TCgca56 in Genome Data Viewer
Location:
11 D; 11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (97687898..97687969)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (97797072..97797143)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene sperm microtubule associated protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E5272 Neighboring gene ribosomal protein L23 Neighboring gene small nucleolar RNA, H/ACA box 21 Neighboring gene STARR-seq mESC enhancer starr_30635 Neighboring gene STARR-positive B cell enhancer ABC_E7052 Neighboring gene nuclear encoded tRNA cysteine 51 (anticodon GCA) Neighboring gene LIM and SH3 protein 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:97669517-97669700 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:97686746-97686855 Neighboring gene RIKEN cDNA B230217C12 gene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    97687898..97687969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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