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SSPN sarcospan [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102483699, updated on 10-Mar-2024

Summary

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Gene symbol
SSPN
Gene description
sarcospan
Locus tag
TREES_T100009599
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See SSPN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159458.1 (4936997..5075198, complement)

NW_006159458.1Genomic Context describing neighboring genes Neighboring gene inositol 1,4,5-trisphosphate receptor type 2 Neighboring gene spindle and kinetochore-associated protein 1 pseudogene Neighboring gene uncharacterized LOC102494672 Neighboring gene basic helix-loop-helix family member e41 Neighboring gene 40S ribosomal protein S4, X isoform-like Neighboring gene Ras association domain family member 8 Neighboring gene uncharacterized LOC102498802

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159458 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of dystrophin-associated glycoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sarcospan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159458.1 Reference TupChi_1.0

    Range
    4936997..5075198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027771037.1 → XP_027626838.1  sarcospan

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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