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LOC102547047 uncharacterized LOC102547047 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102547047, updated on 17-Aug-2024

Summary

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Symbol
LOC102547047provided by RGD
Full Name
uncharacterized LOC102547047provided by RGD
Primary source
RGD:7503123
See related
AllianceGenome:RGD:7503123
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Spleen (RPKM 10.1), Adrenal (RPKM 2.7) and 5 other tissues See more
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Genomic context

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See LOC102547047 in Genome Data Viewer
Location:
10q26
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (81225597..81249166, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (80695067..80762037, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (83584629..83636404, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene prohibitin 1 Neighboring gene uncharacterized LOC120095179 Neighboring gene zinc finger protein 652 Neighboring gene phosphoethanolamine/phosphocholine phosphatase 1 Neighboring gene ABI family, member 3 Neighboring gene G protein subunit gamma transducin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
uncharacterized protein LOC102547047

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    81225597..81249166 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063270141.1 → XP_063126211.1  uncharacterized protein LOC102547047 isoform X1

  2. XM_039087394.2 → XP_038943322.1  uncharacterized protein LOC102547047 isoform X3

  3. XM_006247223.5 → XP_006247285.1  uncharacterized protein LOC102547047 isoform X3

    See identical proteins and their annotated locations for XP_006247285.1

  4. XM_039087393.2 → XP_038943321.1  uncharacterized protein LOC102547047 isoform X3

  5. XM_006247229.3 → XP_006247291.1  uncharacterized protein LOC102547047 isoform X4

    See identical proteins and their annotated locations for XP_006247291.1

  6. XM_039087390.2 → XP_038943318.1  uncharacterized protein LOC102547047 isoform X3

  7. XM_039087392.2 → XP_038943320.1  uncharacterized protein LOC102547047 isoform X3

  8. XM_006247216.3 → XP_006247278.1  uncharacterized protein LOC102547047 isoform X2

    See identical proteins and their annotated locations for XP_006247278.1

  9. XM_006247221.3 → XP_006247283.1  uncharacterized protein LOC102547047 isoform X3

    See identical proteins and their annotated locations for XP_006247283.1

  10. XM_008768190.3 → XP_008766412.1  uncharacterized protein LOC102547047 isoform X3

    See identical proteins and their annotated locations for XP_008766412.1

  11. XM_006247219.3 → XP_006247281.1  uncharacterized protein LOC102547047 isoform X3

    See identical proteins and their annotated locations for XP_006247281.1

  12. XM_008768191.3 → XP_008766413.1  uncharacterized protein LOC102547047 isoform X3

    See identical proteins and their annotated locations for XP_008766413.1

RNA

  1. XR_005490436.2 RNA Sequence

  2. XR_005490435.2 RNA Sequence

  3. XR_010055751.1 RNA Sequence

  4. XR_010055750.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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