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LOC102548331 uncharacterized LOC102548331 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102548331, updated on 17-Aug-2024

Summary

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Symbol
LOC102548331provided by RGD
Full Name
uncharacterized LOC102548331provided by RGD
Primary source
RGD:7703088
See related
EnsemblRapid:ENSRNOG00000086602 AllianceGenome:RGD:7703088
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Muscle (RPKM 55.4), Thymus (RPKM 15.1) and 1 other tissue See more
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Genomic context

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See LOC102548331 in Genome Data Viewer
Location:
10q31
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (83089532..83096263, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (82593150..82599885, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (85541991..85548716, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 23 Neighboring gene uncharacterized LOC134480864 Neighboring gene SRC kinase signaling inhibitor 1 Neighboring gene uncharacterized LOC134480715 Neighboring gene elongin BC and polycomb repressive complex 2 associated protein Neighboring gene uncharacterized LOC120095289 Neighboring gene MLLT6, PHD finger containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    83089532..83096263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005490756.2 RNA Sequence

  2. XR_357868.4 RNA Sequence

    Related
    ENSRNOT00000134285.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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