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LOC102549962 uncharacterized LOC102549962 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102549962, updated on 17-Aug-2024

Summary

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Symbol
LOC102549962provided by RGD
Full Name
uncharacterized LOC102549962provided by RGD
Primary source
RGD:7627339
See related
EnsemblRapid:ENSRNOG00000079225 AllianceGenome:RGD:7627339
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Lung (RPKM 15.4) and Heart (RPKM 13.5) See more
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Genomic context

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See LOC102549962 in Genome Data Viewer
Location:
12q16
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (42399836..42400981)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (36739371..36740501)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (42094220..42095389, complement)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120095982 Neighboring gene T-box transcription factor 5 Neighboring gene uncharacterized LOC134481193 Neighboring gene T-box transcription factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    42399836..42400981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_358701.5 RNA Sequence

    Related
    ENSRNOT00000160236.1
Nucleotide Protein Strain
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Gene LinkOut

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