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Zfp933l1 zinc finger protein 933 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102550729, updated on 4-Jan-2025

Summary

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Official Symbol
Zfp933l1provided by RGD
Official Full Name
zinc finger protein 933provided by RGD
Primary source
RGD:7528461
See related
AllianceGenome:RGD:7528461
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable metal ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Kidney (RPKM 10.4), Spleen (RPKM 8.6) and 9 other tissues See more
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Genomic context

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See Zfp933l1 in Genome Data Viewer
Location:
1q55
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (270279732..270292057)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (260293716..260306040)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (282541758..282552098)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor kinase 5 Neighboring gene small nucleolar RNA SNORA44 Neighboring gene RNA, U6 small nuclear 28 Neighboring gene zinc finger protein 950 Neighboring gene glycine cleavage system protein H like1 Neighboring gene carboxylesterase 2I

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
zinc finger protein 431-like
Names
zinc finger protein 120-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    270279732..270292057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039101464.2 → XP_038957392.1  zinc finger protein 431-like

    Conserved Domains (4) summary
    COG5048
    Location:101 → 261
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:161 → 181
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:4 → 44
    KRAB; KRAB box
    pfam13465
    Location:257 → 282
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version

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