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LOC102550863 uncharacterized LOC102550863 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102550863, discontinued on 23-Mar-2021
  • This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.

Summary

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Symbol
LOC102550863provided by RGD
Full Name
uncharacterized LOC102550863provided by RGD
Primary source
RGD:7604232
Gene type
ncRNA
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.
Expression
Biased expression in Brain (RPKM 43.3) and Testes (RPKM 4.7) See more
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Genomic context

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See LOC102550863 in Genome Data Viewer
Location:
19p11
Exon count:
9
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (20548891..20606862, complement)
106 latest, but not current Rn_Celera (GCF_000002265.2) 19 AC_000087.1 (19430538..19457167, complement)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005118.4 Reference Rnor_6.0 Primary Assembly

    Range
    20548891..20606862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001842260.1 RNA Sequence

  2. XR_001842256.1 RNA Sequence

  3. XR_597164.1 RNA Sequence

  4. XR_001842255.1 RNA Sequence

  5. XR_001842258.1 RNA Sequence

  6. XR_001842259.1 RNA Sequence

  7. XR_597165.1 RNA Sequence

  8. XR_001842257.1 RNA Sequence

  9. XR_001842254.1 RNA Sequence

Alternate Rn_Celera

Genomic

  1. AC_000087.1 Alternate Rn_Celera

    Range
    19430538..19457167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001834644.1 RNA Sequence

  2. XR_001834640.1 RNA Sequence

  3. XR_001834639.1 RNA Sequence

  4. XR_001834642.1 RNA Sequence

  5. XR_001834643.1 RNA Sequence

  6. XR_001834645.1 RNA Sequence

  7. XR_001834641.1 RNA Sequence

  8. XR_001834638.1 RNA Sequence

Gene LinkOut

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