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LOC102551899 uncharacterized LOC102551899 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102551899, updated on 17-Aug-2024

Summary

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Symbol
LOC102551899provided by RGD
Full Name
uncharacterized LOC102551899provided by RGD
Primary source
RGD:7684578
See related
AllianceGenome:RGD:7684578
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Thymus (RPKM 134.5), Spleen (RPKM 13.2) and 2 other tissues See more
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Genomic context

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See LOC102551899 in Genome Data Viewer
Location:
17p14
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (21027983..21072907, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (20821998..20859865, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (24493824..24499492)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102550662 Neighboring gene uncharacterized LOC134482701 Neighboring gene uncharacterized LOC120097898 Neighboring gene CD83 molecule Neighboring gene uncharacterized LOC120097831

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. HAfTs are novel lncRNA transcripts from aflatoxin exposure. Merrick BA, et al. PLoS One, 2018. PMID 29351317, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    21027983..21072907 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010059143.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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