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LOC102555465 uncharacterized LOC102555465 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102555465, updated on 17-Aug-2024

Summary

Symbol
LOC102555465provided by RGD
Full Name
uncharacterized LOC102555465provided by RGD
Primary source
RGD:7678966
See related
EnsemblRapid:ENSRNOG00000074799 AllianceGenome:RGD:7678966
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Lung (RPKM 44.8), Kidney (RPKM 43.9) and 6 other tissues See more
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Genomic context

See LOC102555465 in Genome Data Viewer
Location:
1p12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (24395737..24413889, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (22576578..22594738, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (23781647..23800356, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene EYA transcriptional coactivator and phosphatase 4 Neighboring gene uncharacterized LOC134482584 Neighboring gene uncharacterized LOC120098871 Neighboring gene uncharacterized LOC120098885 Neighboring gene transcription factor 21

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    24395737..24413889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005497574.2 RNA Sequence

    Related
    ENSRNOT00000141900.1
  2. XR_589883.4 RNA Sequence