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Gm33517 predicted gene, 33517 [ Mus musculus (house mouse) ]

Gene ID: 102636458, updated on 17-Aug-2024

Summary

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Official Symbol
Gm33517provided by MGI
Official Full Name
predicted gene, 33517provided by MGI
Primary source
MGI:MGI:5592676
See related
AllianceGenome:MGI:5592676
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm33517 in Genome Data Viewer
Location:
1 D; 1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (87656290..87683468, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (87728568..87755746, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene neuraminidase 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:89504315-89504498 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:89523069-89523293 Neighboring gene inositol polyphosphate-5-phosphatase D Neighboring gene STARR-positive B cell enhancer ABC_E2553 Neighboring gene STARR-seq mESC enhancer starr_01618 Neighboring gene STARR-seq mESC enhancer starr_01619 Neighboring gene predicted gene, 33470 Neighboring gene STARR-seq mESC enhancer starr_01622 Neighboring gene STARR-positive B cell enhancer ABC_E1554 Neighboring gene autophagy related 16 like 1 Neighboring gene predicted gene, 25395 Neighboring gene predicted gene, 53572 Neighboring gene small Cajal body-specific RNA 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_157046.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC159967

  2. NR_157047.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC159967

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    87656290..87683468 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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