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Gm33628 predicted gene, 33628 [ Mus musculus (house mouse) ]

Gene ID: 102636612, updated on 22-Oct-2024

Summary

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Official Symbol
Gm33628provided by MGI
Official Full Name
predicted gene, 33628provided by MGI
Primary source
MGI:MGI:5592787
See related
Ensembl:ENSMUSG00000124436 AllianceGenome:MGI:5592787
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm33628 in Genome Data Viewer
Location:
12 F1; 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (108722770..108724446, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (108756515..108758191, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene delta 4-desaturase, sphingolipid 2 Neighboring gene predicted gene, 33467 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:109939490-109939738 Neighboring gene predicted gene, 40572 Neighboring gene STARR-seq mESC enhancer starr_33246 Neighboring gene STARR-seq mESC enhancer starr_33247 Neighboring gene STARR-positive B cell enhancer ABC_E1156 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:110004036-110004330 Neighboring gene predicted gene, 33682 Neighboring gene predicted gene, 34220 Neighboring gene STARR-positive B cell enhancer ABC_E11524

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Tamoxifen feeding method is suitable for efficient conditional knockout. Yoshinobu K, et al. Exp Anim, 2021 Feb 6. PMID 33055491, Free PMC Article
  2. Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. Taniwaki T, et al. Dev Growth Differ, 2005 Apr. PMID 15840001
  3. Exchangeable gene trap using the Cre/mutated lox system. Araki K, et al. Cell Mol Biol (Noisy-le-grand), 1999 Jul. PMID 10512203

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    108722770..108724446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_381913.2 RNA Sequence

    Related
    ENSMUST00000263710.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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