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LOC102638047 sp110 nuclear body protein-like [ Mus musculus (house mouse) ]

Gene ID: 102638047, updated on 27-Nov-2024

Summary

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Gene symbol
LOC102638047
Gene description
sp110 nuclear body protein-like
See related
Ensembl:ENSMUSG00000079808
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See LOC102638047 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 Unlocalized Scaffold NT_166282.1 (122405..147852, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 Unlocalized Scaffold NT_166282.1 (122405..147904, complement)

NT_166282.1Genomic Context describing neighboring genes Neighboring gene odorant receptor 131-2-like Neighboring gene uncharacterized LOC100041877 Neighboring gene uncharacterized LOC102637495 Neighboring gene uncharacterized LOC102637781

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
sp110 nuclear body protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001378739.1 → NP_001365668.1  sp110 nuclear body protein-like isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC168977
    UniProtKB/TrEMBL
    A0AAG1FCE8
    Related
    ENSMUSP00000111587.3, ENSMUST00000115924.3
    Conserved Domains (2) summary
    pfam01342
    Location:361 → 433
    SAND; SAND domain
    pfam03172
    Location:8 → 106
    HSR; HSR domain

  2. NM_001378740.1 → NP_001365669.1  sp110 nuclear body protein-like isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC168977
    Conserved Domains (1) summary
    pfam03172
    Location:8 → 106
    HSR; HSR domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NT_166282.1 Reference GRCm39 C57BL/6J

    Range
    122405..147852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011249829.4 → XP_011248131.1  sp110 nuclear body protein-like isoform X4

    Conserved Domains (1) summary
    pfam03172
    Location:31 → 129
    HSR; HSR domain

  2. XM_011249825.4 → XP_011248127.1  sp110 nuclear body protein-like isoform X1

    Conserved Domains (2) summary
    pfam01342
    Location:387 → 459
    SAND; SAND domain
    pfam03172
    Location:31 → 129
    HSR; HSR domain

  3. XM_011249827.4 → XP_011248129.1  sp110 nuclear body protein-like isoform X2

    Conserved Domains (2) summary
    pfam01342
    Location:383 → 455
    SAND; SAND domain
    pfam03172
    Location:31 → 129
    HSR; HSR domain

  4. XM_011249828.4 → XP_011248130.1  sp110 nuclear body protein-like isoform X3

    Conserved Domains (3) summary
    PHA03377
    Location:162 → 355
    PHA03377; EBNA-3C; Provisional
    pfam01342
    Location:333 → 405
    SAND; SAND domain
    pfam03172
    Location:31 → 129
    HSR; HSR domain
Nucleotide Protein
Heading Accession and Version

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