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Gm20684 predicted gene 20684 [ Mus musculus (house mouse) ]

Gene ID: 102641467, updated on 22-Oct-2024

Summary

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Official Symbol
Gm20684provided by MGI
Official Full Name
predicted gene 20684provided by MGI
Primary source
MGI:MGI:5313131
See related
Ensembl:ENSMUSG00000093405 AllianceGenome:MGI:5313131
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in liver adult (RPKM 1.1), cerebellum adult (RPKM 0.5) and 23 other tissues See more
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Genomic context

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See Gm20684 in Genome Data Viewer
Location:
7 C; 7 35.36 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (65509015..65511790, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (65859267..65862042, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1810008I18 gene Neighboring gene predicted gene, 51485 Neighboring gene STARR-seq mESC enhancer starr_19067 Neighboring gene STARR-seq mESC enhancer starr_19068 Neighboring gene STARR-seq mESC enhancer starr_19072 Neighboring gene proprotein convertase subtilisin/kexin type 6 Neighboring gene STARR-seq mESC enhancer starr_19080 Neighboring gene predicted gene, 51486 Neighboring gene STARR-seq mESC enhancer starr_19081 Neighboring gene small nuclear ribonucleoprotein polypeptide A'

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_169041.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC165968
    Related
    ENSMUST00000176744.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    65509015..65511790 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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