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LOC102724227 uncharacterized LOC102724227 [ Homo sapiens (human) ]

Gene ID: 102724227, updated on 10-Dec-2024

Summary

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Gene symbol
LOC102724227
Gene description
uncharacterized LOC102724227
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC102724227 in Genome Data Viewer
Location:
12p12.3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (18753160..18817331)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (18629086..18693259)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:18876609-18877808 Neighboring gene phospholipase C zeta 1 Neighboring gene proteasome 26S subunit, ATPase 1 pseudogene 9 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:18906323-18906894 Neighboring gene capping actin protein of muscle Z-line subunit alpha 3 Neighboring gene MPRA-validated peak1589 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr12:19158395-19158896 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:19183693-19184892 Neighboring gene uncharacterized LOC107984527 Neighboring gene Sharpr-MPRA regulatory region 14790 Neighboring gene ribosomal protein L7 pseudogene 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    18753160..18817331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001749032.2 RNA Sequence

  2. XR_429054.4 RNA Sequence

  3. XR_931403.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    18629086..18693259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083319.1 RNA Sequence

  2. XR_007083318.1 RNA Sequence

  3. XR_007083320.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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