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LOC102724760 immunoglobulin heavy variable 1/OR15-1 pseudogene [ Homo sapiens (human) ]

Gene ID: 102724760, updated on 10-Dec-2024

Summary

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Gene symbol
LOC102724760
Gene description
immunoglobulin heavy variable 1/OR15-1 pseudogene
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in lymph node (RPKM 24.3), colon (RPKM 18.1) and 10 other tissues See more
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Genomic context

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See LOC102724760 in Genome Data Viewer
Location:
15q11.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (21717666..21718307, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 4 subfamily N member 3B pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:22424973-22425474 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:22425475-22425974 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:22433363-22433864 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:22433865-22434364 Neighboring gene 40S ribosomal protein S8-like Neighboring gene immunoglobulin heavy variable 1/OR15-3 (pseudogene) Neighboring gene putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

General gene information

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Other Names

  • Ig heavy chain V-I region V35-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135695.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC135068, AI799757, DN998389

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    21717666..21718307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p14 PATCHES

    Range
    2306823..2307464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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