U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102724960 uncharacterized LOC102724960 [ Homo sapiens (human) ]

Gene ID: 102724960, updated on 10-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
LOC102724960
Gene description
uncharacterized LOC102724960
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC102724960 in Genome Data Viewer
Location:
12q22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (94472317..94538965)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (94453124..94519734)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene centrosomal protein 83 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr12:94819773-94820337 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6783 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6784 Neighboring gene RNA binding motif single stranded interacting protein 2 pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:94849571-94849720 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6785 Neighboring gene CEP83 divergent transcript Neighboring gene NANOG hESC enhancer GRCh37_chr12:94915144-94915727 Neighboring gene RNA, 7SL, cytoplasmic 483, pseudogene Neighboring gene NSA2 pseudogene 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:94954567-94955193 Neighboring gene SUCLG2 pseudogene 2 Neighboring gene microRNA 5700

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. Comuzzie AG, et al. PLoS One, 2012. PMID 23251661, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    94472317..94538965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_945224.3 RNA Sequence

  2. XR_429176.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    94453124..94519734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082932.1 RNA Sequence

  2. XR_007082933.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials