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ARMCX1 armadillo repeat containing X-linked 1 [ Pteropus alecto (black flying fox) ]

Gene ID: 102899029, updated on 30-Mar-2024

Summary

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Gene symbol
ARMCX1
Gene description
armadillo repeat containing X-linked 1
Locus tag
PAL_GLEAN10002197
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See ARMCX1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006442112.1 (145568..149690, complement)

NW_006442112.1Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing X-linked 6 Neighboring gene protein ARMCX6-like Neighboring gene U6 spliceosomal RNA Neighboring gene armadillo repeat containing X-linked 4 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006442112 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
armadillo repeat-containing X-linked protein 1
Names
Armadillo repeat-containing X-linked protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006442112.1 Reference ASM32557v1 Primary Assembly

    Range
    145568..149690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025039042.1 → XP_024894810.1  armadillo repeat-containing X-linked protein 1

    UniProtKB/TrEMBL
    L5K0L9
    Conserved Domains (3) summary
    sd00044
    Location:212 → 239
    HEAT; HEAT repeat [structural motif]
    pfam04826
    Location:199 → 442
    Arm_2; Armadillo-like
    cl00884
    Location:83 → 146
    AIM24; Mitochondrial biogenesis AIM24

  2. XM_006920688.3 → XP_006920750.1  armadillo repeat-containing X-linked protein 1

    See identical proteins and their annotated locations for XP_006920750.1

    UniProtKB/TrEMBL
    L5K0L9
    Conserved Domains (3) summary
    sd00044
    Location:212 → 239
    HEAT; HEAT repeat [structural motif]
    pfam04826
    Location:199 → 442
    Arm_2; Armadillo-like
    cl00884
    Location:83 → 146
    AIM24; Mitochondrial biogenesis AIM24

  3. XM_015596218.2 → XP_015451704.1  armadillo repeat-containing X-linked protein 1

    UniProtKB/TrEMBL
    L5K0L9
    Conserved Domains (3) summary
    sd00044
    Location:212 → 239
    HEAT; HEAT repeat [structural motif]
    pfam04826
    Location:199 → 442
    Arm_2; Armadillo-like
    cl00884
    Location:83 → 146
    AIM24; Mitochondrial biogenesis AIM24

  4. XM_025039043.1 → XP_024894811.1  armadillo repeat-containing X-linked protein 1

    UniProtKB/TrEMBL
    L5K0L9
    Conserved Domains (3) summary
    sd00044
    Location:212 → 239
    HEAT; HEAT repeat [structural motif]
    pfam04826
    Location:199 → 442
    Arm_2; Armadillo-like
    cl00884
    Location:83 → 146
    AIM24; Mitochondrial biogenesis AIM24

  5. XM_025039044.1 → XP_024894812.1  armadillo repeat-containing X-linked protein 1

    UniProtKB/TrEMBL
    L5K0L9
    Conserved Domains (3) summary
    sd00044
    Location:212 → 239
    HEAT; HEAT repeat [structural motif]
    pfam04826
    Location:199 → 442
    Arm_2; Armadillo-like
    cl00884
    Location:83 → 146
    AIM24; Mitochondrial biogenesis AIM24

RNA

  1. XR_003042798.1 RNA Sequence

  2. XR_003042797.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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