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LOC103755523 hemoglobin subunit epsilon [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103755523, updated on 3-Aug-2024

Summary

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Gene symbol
LOC103755523
Gene description
hemoglobin subunit epsilon
See related
Ensembl:ENSMVIG00005009994
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus
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Genomic context

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See LOC103755523 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021938894.1 (263554..273365)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017219433.1 (292725..303854)

NW_021938894.1Genomic Context describing neighboring genes Neighboring gene hemoglobin subunit rho Neighboring gene hemoglobin subunit beta Neighboring gene olfactory receptor 52R1-like Neighboring gene olfactory receptor 51G2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables haptoglobin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables organic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxygen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxygen carrier activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oxygen transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of haptoglobin-hemoglobin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of hemoglobin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hemoglobin subunit epsilon; uncharacterized protein LOC103755523

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021938894.1 Reference ASM171598v3

    Range
    263554..273365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025896811.2 → XP_025752596.2  hemoglobin subunit epsilon isoform X3

    Conserved Domains (1) summary
    cd08925
    Location:128 → 266
    Hb-beta-like; Hemoglobin beta, gamma, delta, epsilon, and related Hb subunits

  2. XM_018089175.3 → XP_017944664.3  uncharacterized protein LOC103755523 isoform X1

    Conserved Domains (1) summary
    cd08925
    Location:128 → 225
    Hb-beta-like; Hemoglobin beta, gamma, delta, epsilon, and related Hb subunits

  3. XM_018089176.3 → XP_017944665.3  uncharacterized protein LOC103755523 isoform X2

    Conserved Domains (1) summary
    cd08925
    Location:128 → 225
    Hb-beta-like; Hemoglobin beta, gamma, delta, epsilon, and related Hb subunits
Nucleotide Protein
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