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PSMB4 proteasome 20S subunit beta 4 [ Pelecanus crispus (Dalmatian pelican) ]

Gene ID: 104039220, updated on 3-Aug-2024

Summary

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Gene symbol
PSMB4
Gene description
proteasome 20S subunit beta 4
Locus tag
N334_09388
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelecanus crispus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Pelecanidae; Pelecanus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See PSMB4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM68737v1 (GCF_000687375.1) Unplaced Scaffold NW_009068671.1 (4..2393)

NW_009068671.1Genomic Context describing neighboring genes Neighboring gene pogo transposable element derived with ZNF domain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009068671.1 Unplaced Scaffold Reference ASM68737v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit beta type-4
Names
Proteasome subunit beta type-4
proteasome subunit beta 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelecanus crispus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68737v1

Genomic

  1. NW_009068671.1 Reference ASM68737v1

    Range
    4..2393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009493821.1 → XP_009492096.1  proteasome subunit beta type-4

    UniProtKB/TrEMBL
    A0A091TIN1
    Conserved Domains (2) summary
    COG0638
    Location:1 → 143
    PRE1; 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones]
    cd03760
    Location:1 → 149
    proteasome_beta_type_4; proteasome beta type-4 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
Nucleotide Protein
Heading Accession and Version

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