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KMT2C lysine methyltransferase 2C [ Cuculus canorus (common cuckoo) ]

Gene ID: 104057025, updated on 3-Aug-2024

Summary

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Gene symbol
KMT2C
Gene description
lysine methyltransferase 2C
See related
EnsemblRapid:ENSCCOG00010005481
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See KMT2C in Genome Data Viewer
Location:
chromosome: 2
Exon count:
62
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 2 NC_071402.1 (153349436..153565761)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009244556.1 (5702857..5918614, complement)

Chromosome 2 - NC_071402.1Genomic Context describing neighboring genes Neighboring gene actin related protein 3B Neighboring gene X-ray repair cross complementing 2 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 11 Neighboring gene protein kinase AMP-activated non-catalytic subunit gamma 2 Neighboring gene Ras homolog, mTORC1 binding

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K4 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MLL3/4 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase 2C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071402.1 Reference bCucCan1.pri

    Range
    153349436..153565761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054060776.1 → XP_053916751.1  histone-lysine N-methyltransferase 2C isoform X1

  2. XM_054060778.1 → XP_053916753.1  histone-lysine N-methyltransferase 2C isoform X3

  3. XM_054060777.1 → XP_053916752.1  histone-lysine N-methyltransferase 2C isoform X2

  4. XM_054060785.1 → XP_053916760.1  histone-lysine N-methyltransferase 2C isoform X10

  5. XM_054060779.1 → XP_053916754.1  histone-lysine N-methyltransferase 2C isoform X4

  6. XM_054060784.1 → XP_053916759.1  histone-lysine N-methyltransferase 2C isoform X9

  7. XM_054060780.1 → XP_053916755.1  histone-lysine N-methyltransferase 2C isoform X5

  8. XM_054060783.1 → XP_053916758.1  histone-lysine N-methyltransferase 2C isoform X8

  9. XM_054060781.1 → XP_053916756.1  histone-lysine N-methyltransferase 2C isoform X6

    Related
    ENSCCOP00010008451.1, ENSCCOT00010009734.1

  10. XM_054060782.1 → XP_053916757.1  histone-lysine N-methyltransferase 2C isoform X7

Nucleotide Protein
Heading Accession and Version

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