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PTPRN2 protein tyrosine phosphatase receptor type N2 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104057041, updated on 3-Aug-2024

Summary

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Gene symbol
PTPRN2
Gene description
protein tyrosine phosphatase receptor type N2
Locus tag
N303_03806
See related
EnsemblRapid:ENSCCOG00010006882
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See PTPRN2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 2 NC_071402.1 (150305362..150958902)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009244556.1 (8370798..8861367, complement)

Chromosome 2 - NC_071402.1Genomic Context describing neighboring genes Neighboring gene extended synaptotagmin 2 Neighboring gene non-SMC condensin II complex subunit G2 Neighboring gene DnaJ heat shock protein family (Hsp40) member B6 Neighboring gene ubiquitin protein ligase E3C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase N2
Names
Receptor-type tyrosine-protein phosphatase N2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071402.1 Reference bCucCan1.pri

    Range
    150305362..150958902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054058934.1 → XP_053914909.1  receptor-type tyrosine-protein phosphatase N2

    Related
    ENSCCOP00010010405.1, ENSCCOT00010012224.1
Nucleotide Protein
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Gene LinkOut

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