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LOC104721881 mitogen-activated protein kinase kinase 2 [ Camelina sativa (false flax) ]

Gene ID: 104721881, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104721881
Gene description
mitogen-activated protein kinase kinase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Genomic context

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See LOC104721881 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 11 NC_025695.1 (6008014..6010551)

Chromosome 11 - NC_025695.1Genomic Context describing neighboring genes Neighboring gene WD repeat-containing protein VIP3-like Neighboring gene pre-mRNA cleavage factor Im 25 kDa subunit 1 Neighboring gene patatin-like protein 8 Neighboring gene uncharacterized LOC104727677

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025695.1 Chromosome 11 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing. Liang C, et al. BMC Genomics, 2013 Mar 5. PMID 23496985, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitogen-activated protein kinase kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025695.1 Reference Cs

    Range
    6008014..6010551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010439957.2 → XP_010438259.1  mitogen-activated protein kinase kinase 2

    Conserved Domains (2) summary
    cd06623
    Location:68 → 334
    PKc_MAPKK_plant_like; Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and similar proteins
    smart00220
    Location:71 → 330
    S_TKc; Serine/Threonine protein kinases, catalytic domain
Nucleotide Protein
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