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panx1b pannexin 1b [ Esox lucius (northern pike) ]

Gene ID: 105025993, updated on 18-Jun-2024

Summary

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Gene symbol
panx1b
Gene description
pannexin 1b
See related
Ensembl:ENSELUG00000000298
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
panx1
Orthologs
zebrafish all
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Genomic context

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See panx1b in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 7 NC_047575.1 (20016731..20023500)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG07 NC_025974.4 (30938438..30945120, complement)

Chromosome 7 - NC_047575.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109615981 Neighboring gene ependymin Neighboring gene CWC15 spliceosome associated protein homolog Neighboring gene sestrin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei. Rondeau EB, et al. PLoS One, 2014. PMID 25069045, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic cation transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of interleukin-1 production IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pannexin-1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047575.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    20016731..20023500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010897121.3 → XP_010895423.2  pannexin-1b

    UniProtKB/TrEMBL
    A0A3P8XS64
    Related
    ENSELUP00000007317.3, ENSELUT00000007463.3
    Conserved Domains (1) summary
    cl03000
    Location:46 → 148
    Innexin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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