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FAM50A family with sequence similarity 50 member A [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 105242266, updated on 13-Mar-2024

Summary

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Gene symbol
FAM50A
Gene description
family with sequence similarity 50 member A
Locus tag
PANDA_019988
See related
Ensembl:ENSAMEG00000000273
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See FAM50A in Genome Data Viewer
Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (111605256..111611916)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219235.1 (50889..57158)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene tafazzin-like Neighboring gene uncharacterized LOC117797471 Neighboring gene GDP dissociation inhibitor 1 Neighboring gene ATPase H+ transporting accessory protein 1 Neighboring gene plexin A3 Neighboring gene EKC/KEOPS complex subunit LAGE3-like Neighboring gene ubiquitin like 4A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM50A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    111605256..111611916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011237730.3 → XP_011236032.2  protein FAM50A

    UniProtKB/TrEMBL
    G1L089
    Related
    ENSAMEP00000000291.2, ENSAMET00000000301.2
Nucleotide Protein
Heading Accession and Version

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