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LOC105242269 zinc finger protein 45 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 105242269, updated on 16-Nov-2023

Summary

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Gene symbol
LOC105242269
Gene description
zinc finger protein 45
Locus tag
PANDA_020004
See related
Ensembl:ENSAMEG00000006129
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Also known as
ZNF45
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Genomic context

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See LOC105242269 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 12 NC_048229.1 (34482251..34503920, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219237.1 (159999..181012, complement)

Chromosome 12 - NC_048229.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 226 Neighboring gene zinc finger protein 234 Neighboring gene zinc finger protein 404 Neighboring gene zinc finger protein 283

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048229.1 Reference ASM200744v2 Primary Assembly

    Range
    34482251..34503920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034639257.1 → XP_034495148.1  zinc finger protein 45 isoform X2

  2. XM_034639254.1 → XP_034495145.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4
    Related
    ENSAMEP00000006450.1, ENSAMET00000006717.2

  3. XM_034639255.1 → XP_034495146.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  4. XM_034639253.1 → XP_034495144.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  5. XM_034639252.1 → XP_034495143.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  6. XM_034639248.1 → XP_034495139.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  7. XM_019810395.2 → XP_019665954.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  8. XM_019810394.2 → XP_019665953.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  9. XM_034639249.1 → XP_034495140.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  10. XM_019810397.2 → XP_019665956.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  11. XM_019810392.2 → XP_019665951.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  12. XM_034639247.1 → XP_034495138.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  13. XM_034639251.1 → XP_034495142.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4

  14. XM_034639256.1 → XP_034495147.1  zinc finger protein 45 isoform X1

    UniProtKB/TrEMBL
    G1LHQ4
Nucleotide Protein
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