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GALNTL6 polypeptide N-acetylgalactosaminyltransferase like 6 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 105242325, updated on 13-Mar-2024

Summary

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Gene symbol
GALNTL6
Gene description
polypeptide N-acetylgalactosaminyltransferase like 6
Locus tag
PANDA_020124
See related
Ensembl:ENSAMEG00000024177
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See GALNTL6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 5 NC_048222.1 (85020608..86204727, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219283.1 (20147..164660, complement)

Chromosome 5 - NC_048222.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105236377 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene high mobility group box 2 Neighboring gene uncharacterized LOC117802406 Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene uncharacterized LOC117802407 Neighboring gene xylosyltransferase 1-like Neighboring gene small nucleolar RNA SNORD113/SNORD114 family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048222.1 Reference ASM200744v2 Primary Assembly

    Range
    85020608..86204727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034661384.1 → XP_034517275.1  polypeptide N-acetylgalactosaminyltransferase-like 6 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JJP0

  2. XM_034661383.1 → XP_034517274.1  polypeptide N-acetylgalactosaminyltransferase-like 6 isoform X1

    UniProtKB/TrEMBL
    A0A7N5JJP0
    Related
    ENSAMEP00000026472.1, ENSAMET00000034752.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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