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COL22A1 collagen type XXII alpha 1 chain [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 105242358, updated on 13-Mar-2024

Summary

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Gene symbol
COL22A1
Gene description
collagen type XXII alpha 1 chain
Locus tag
PANDA_020539
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See COL22A1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
62
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 9 NC_048226.1 (99138401..99373560, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219318.1 (157176..252688, complement)

Chromosome 9 - NC_048226.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC109491010 Neighboring gene family with sequence similarity 135 member B Neighboring gene potassium two pore domain channel subfamily K member 9 Neighboring gene trafficking protein particle complex subunit 9 Neighboring gene tropomyosin alpha-3 chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-1(XXII) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048226.1 Reference ASM200744v2 Primary Assembly

    Range
    99138401..99373560 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034668525.1 → XP_034524416.1  collagen alpha-1(XXII) chain

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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