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Gm39036 predicted gene, 39036 [ Mus musculus (house mouse) ]

Gene ID: 105242975, updated on 22-Oct-2024

Summary

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Official Symbol
Gm39036provided by MGI
Official Full Name
predicted gene, 39036provided by MGI
Primary source
MGI:MGI:5621921
See related
Ensembl:ENSMUSG00000138457 AllianceGenome:MGI:5621921
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm39036 in Genome Data Viewer
Location:
7 D1; 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (73252501..73253857)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (73602753..73604109)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene repulsive guidance molecule family member A Neighboring gene predicted gene 44758 Neighboring gene STARR-seq mESC enhancer starr_19180 Neighboring gene STARR-seq mESC enhancer starr_19181 Neighboring gene chromodomain helicase DNA binding protein 2 Neighboring gene STARR-seq mESC enhancer starr_19183 Neighboring gene STARR-seq mESC enhancer starr_19186 Neighboring gene STARR-seq mESC enhancer starr_19187 Neighboring gene STARR-positive B cell enhancer ABC_E6553 Neighboring gene CRISPRi-validated cis-regulatory element for Chaserr and Chd2 Neighboring gene CHD2 adjacent suppressive regulatory RNA Neighboring gene STARR-seq mESC enhancer starr_19190 Neighboring gene STARR-positive B cell enhancer ABC_E1342 Neighboring gene STARR-positive B cell enhancer ABC_E6554 Neighboring gene STARR-seq mESC enhancer starr_19193 Neighboring gene predicted gene, 30149 Neighboring gene STARR-seq mESC enhancer starr_19194 Neighboring gene STARR-seq mESC enhancer starr_19195 Neighboring gene predicted gene, 26176 Neighboring gene Smad nuclear interacting protein 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    73252501..73253857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_882227.2 RNA Sequence

    Related
    ENSMUST00000347972.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials