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Gm39391 predicted gene, 39391 [ Mus musculus (house mouse) ]

Gene ID: 105243482, updated on 17-Aug-2024

Summary

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Official Symbol
Gm39391provided by MGI
Official Full Name
predicted gene, 39391provided by MGI
Primary source
MGI:MGI:5622276
See related
AllianceGenome:MGI:5622276
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm39391 in Genome Data Viewer
Location:
11 D; 11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (101587077..101588406)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (101696251..101697580)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9038 Neighboring gene U2 small nuclear RNA 10 Neighboring gene ADP-ribosylation factor-like 4D Neighboring gene STARR-seq mESC enhancer starr_30778 Neighboring gene STARR-positive B cell enhancer ABC_E3025 Neighboring gene DEAH-box helicase 8 Neighboring gene STARR-seq mESC enhancer starr_30780 Neighboring gene ets variant 4 Neighboring gene STARR-positive B cell enhancer ABC_E2371 Neighboring gene STARR-seq mESC enhancer starr_30781 Neighboring gene predicted gene, 39392

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    101587077..101588406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_880218.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials